antha/

Package Inventory containing example part structures and defines a PartSource interface which allows the making of a custom inventory.

Example labware definitions

Example liquidclasses and liquid properties

Package parser provides methods for reading file formats, in particular focused toward dna sequence parsing

Package for working with bioprocessing unitoperations

Package for dealing with manipulation of buffers Package for dealing with manipulation of buffers

pacakge order deals with adding order details to an LHComponent.

Look up tables stroring device properties.

Package doe facilitates DOE methodology in antha

Package containing formulae for the estimation of evaporation times based upon thermodynamics and empirical equations Package for performing engineering calculations; at present this consists of evaporation rate estimation, thawtime estimation and fluid dynamics Package for performing engineering calculations; at present this consists of evaporation rate estimation, thawtime estimation and fluid dynamics

Package enzymes for working with enzymes; in particular restriction enzymes

Package lookup enables looking up restriction enzyme properties from name.

Package export provides functions for exporting common file formats into the Antha File type.

Package for interacting with the iGem registry

Package jobfile provides for basic operations for manipulating files associated with a job

This is a package that contains types and function used for PCR reactions

Package platereader contains functions for manipulating absorbance readings and platereader data.

interface platereaderparse.go Part of the Antha language Copyright (C) 2015 The Antha authors.

Package plot provides methods for plotting data.

Package for interacting with the pubchem database to look up chemical properties

Package rebase for parsing the rebase restriction enzyme database

Package schemas contains utilities for defining data schemas.

Package search is a utility package providing functions useful for: Searching for a target entry in a slice; Removing duplicate values from a slice; Comparing the Name of two entries of any type with a Name() method returning a string.

Package sequences is for interacting with and manipulating biological sequences; in extension to methods available in wtype Package sequences is for interacting with and manipulating biological sequences; in extension to methods available in wtype Package sequences is for interacting with and manipulating biological sequences; in extension to methods available in wtype Package sequences is for interacting with and manipulating biological sequences; in extension to methods available in wtype Package sequences is for interacting with and manipulating biological sequences; in extension to methods available in wtype Package sequences is for interacting with and manipulating biological sequences; in extension to methods available in wtype Package sequences is for interacting with and manipulating biological sequences; in extension to methods available in wtype synthesisvalidation.go Package sequences is for interacting with and manipulating biological sequences; in extension to methods available in wtype

Package for processing sequencing results

Package align allows aligning Antha sequences using the biogo implementation of the Needleman-Wunsch and Smith-Waterman alignment algorithms

Package feat provides the base for storage and manipulation of biological interval information.

Package seqio provides interfaces for sequence I/O functions.

Package fasta provides types to read and write FASTA format files.

Package seq provides the base for storage and manipulation of biological sequence information.

Package linear handles single sequences.

Package blast provides support for interaction with the NCBI BLAST service.

Package entrez provides support for interaction with the NCBI Entrez Utility Programs (E-utilities).

Package ncbi provides support for interaction with the NCBI services, Entrez and Blast.

Package for performing blast queries

package for querying all of NCBI databases

Package for designing oligos

package parse converts DNA sequence files into a set of DNA sequences.

package fasta converts DNA sequence files in FASTA format into a set of DNA sequences.

package gdx converts DNA sequence files in .gdx format into a set of DNA sequences.

package genbank converts DNA sequence files in genbank format into a set of DNA sequences.

Package plasmid checks for common plasmid features in a test DNA sequence.

Functions used in calculating mass transfer in microwells

solutions is a utility package for working with solutions of LHComponents utility package for working with solutions solutions is a utility package for working with solutions of LHComponents

Package spreadsheet for interacting with spreadsheets Package spreadsheet for interacting with spreadsheets

Package text formats strings for printing in a terminal using ansi codes

Package data provides lazy data tables with file format support.

Package csv provides tools for data tables seriaization to/from CSV files.

Package parquet provides tools for data tables serialization to and from Parquet files - in the form of files on disk, memory buffer or io.Reader/io.Writer.

Package mixer deals with mixing and sampling in Antha

Package num provides tools for floats arithmetic.

defines types for dealing with liquid handling requests defines types for dealing with liquid handling requests defines types for dealing with liquid handling requests solutions is a utility package for working with solutions of LHComponents Package wtype contains core Antha types

Package wunit is a core Antha package for dealing with units in Antha Core Antha package for dealing with units in Antha

Utility package anthalib/wutil/ints.go: Part of the Antha language Copyright (C) 2016 The Antha authors.

Package text formats strings for printing in a terminal using ansi codes