README
¶
This repository contains several packages that can read and write common file formats used by computational biology software.
Documentation for every package can be found here:
http://godoc.org/github.com/TuftsBCB/io
Installation
Once you have Go installed, just run
go get github.com/TuftsBCB/io
to install the packages.
Documentation
¶
There is no documentation for this package.
Source Files
Directories
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| Path | Synopsis |
|---|---|
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Package fasta provides routines for reading and writing FASTA files and aligned FASTA files.
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Package fasta provides routines for reading and writing FASTA files and aligned FASTA files. |
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Package hhr provides routines for reading (but not writing) hhr files, which are the output produced by hhsuite's hhsearch and hhblits programs.
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Package hhr provides routines for reading (but not writing) hhr files, which are the output produced by hhsuite's hhsearch and hhblits programs. |
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Package hhm parses hhm files generated by the HHsuite programs.
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Package hhm parses hhm files generated by the HHsuite programs. |
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Package msa reads and writes multiple sequence alignments in FASTA, A2M or A3M formats.
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Package msa reads and writes multiple sequence alignments in FASTA, A2M or A3M formats. |
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Package newick provides facilities for reading and writing trees in the Newick format.
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Package newick provides facilities for reading and writing trees in the Newick format. |
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Package pdbx provides types and functions for reading PDBx/mmCIF formatted files conveniently.
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Package pdbx provides types and functions for reading PDBx/mmCIF formatted files conveniently. |
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