chado

package
v0.0.0-...-8f2270e Latest Latest
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Published: Mar 28, 2014 License: GPL-2.0 Imports: 3 Imported by: 0

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Types

type Sqlite

type Sqlite struct {

	// instance of Organism, should have genus and species defined
	*gochado.Organism
	// contains filtered or unexported fields
}

Sqlite backend for loading GPAD data from staging to chado tables

func NewChadoSqlite

func NewChadoSqlite(dbh *sqlx.DB, parser *gochado.SqlParser, org *gochado.Organism) *Sqlite

Create new instatnce of Sqlite structure

func (*Sqlite) AlterTables

func (sqlite *Sqlite) AlterTables()

func (*Sqlite) BulkLoad

func (sqlite *Sqlite) BulkLoad()

func (*Sqlite) ResetTables

func (sqlite *Sqlite) ResetTables()

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