rnnr

command module

v1.4.1 Latest Latest Go to latest Published: Jul 27, 2021 License: GPL-3.0 Imports: 1 Imported by: 0

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Repository

github.com/labbcb/rnnr

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README ¶

RNNR: distributed task execution system for scaling reproducible workflows

RNNR is a bioinformatics task processing system for distributed computing environments. It was designed to work with a workflow management system, such as Cromwell and Nextflow, through the Task Execution Service (TES) API. The workflow manager submits tasks to RNNR that distributes the processing load among computational nodes connected in a local network. The system is composed of the main instance and one or more worker instances. A distributed file system (NFS for example) is required.

Full documentation at https://bcblab.org/rnnr.

Documentation ¶

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Source Files ¶

View all Source files

main.go

Directories ¶

Path	Synopsis
client Package client implements Task Execution Service API for requesting servers.	Package client implements Task Execution Service API for requesting servers.
cmd Package cmd implements command line commands.	Package cmd implements command line commands.
models
proto
server Package server implements RNNR main logic to manage tasks and worker nodes.	Package server implements RNNR main logic to manage tasks and worker nodes.

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