Documentation ¶
Overview ¶
main package, and file, is responsible for taking in users arguments, parsing them, and calling on the primary to perform the work that genoassist does
Directories ¶
Path | Synopsis |
---|---|
constants holds all the constants shared between packages
|
constants holds all the constants shared between packages |
responsible for preparing GenoAssist to perform assemblies by pulling all the necessary Docker containers from DockerHub
|
responsible for preparing GenoAssist to perform assemblies by pulling all the necessary Docker containers from DockerHub |
a collection of interface specifications for objects that are part of the primary package
|
a collection of interface specifications for objects that are part of the primary package |
replica is responsible for launching and coordinating processes such as assembly and parsing for the primary
|
replica is responsible for launching and coordinating processes such as assembly and parsing for the primary |
components
defines interfaces that have to be satisfied by components
|
defines interfaces that have to be satisfied by components |
components/assembler
contains the definition and work associated with assemblers
|
contains the definition and work associated with assemblers |
the reporter package computes multiple statistics that quantify the quality of a collection of contigs
|
the reporter package computes multiple statistics that quantify the quality of a collection of contigs |
contains the definition of an Result
|
contains the definition of an Result |
Click to show internal directories.
Click to hide internal directories.