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Published: Aug 18, 2020 License: Apache-2.0

Directories

Path Synopsis
bam
Package bam provides types and functions that augment BAM and SAM packages in github.com/biogo/hts.
Package bam provides types and functions that augment BAM and SAM packages in github.com/biogo/hts.
Package bampair provides a way to get the mate of each read when reading a BAM/PAM file that is sorted by position.
Package bampair provides a way to get the mate of each read when reading a BAM/PAM file that is sorted by position.
Package bamprovider provider utilities for scanning a BAM/PAM file in parallel.
Package bamprovider provider utilities for scanning a BAM/PAM file in parallel.
Package bgzf includes a Writer for the .bgzf (block gzipped) file format.
Package bgzf includes a Writer for the .bgzf (block gzipped) file format.
Package fasta contains code for parsing (optionally indexed) FASTA files.
Package fasta contains code for parsing (optionally indexed) FASTA files.
Package fastq provides code for working with FASTQ format data.
Package fastq provides code for working with FASTQ format data.
pam
Package pam implements PAM reader and writer.
Package pam implements PAM reader and writer.
fieldio
Package fieldio provides a reader and a writer for individual column (field).
Package fieldio provides a reader and a writer for individual column (field).

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