Documentation ¶
Overview ¶
package genbank converts DNA sequence files in genbank format into a set of DNA sequences.
Index ¶
- func GenbankContentsToAnnotatedSeq(contentsinbytes []byte) (annotated wtype.DNASequence, err error)
- func GenbankFeatureToDNASequence(file wtype.File, featurename string) (wtype.DNASequence, error)
- func GenbankToAnnotatedSeq(file wtype.File) (annotated wtype.DNASequence, err error)
- func GenbankToFeaturelessDNASequence(sequenceFile wtype.File) (wtype.DNASequence, error)
Constants ¶
This section is empty.
Variables ¶
This section is empty.
Functions ¶
func GenbankContentsToAnnotatedSeq ¶
func GenbankContentsToAnnotatedSeq(contentsinbytes []byte) (annotated wtype.DNASequence, err error)
parses contents of a genbank file into a DNASEquence making features from annotations
func GenbankFeatureToDNASequence ¶
Parses a feature from a genbank file into a DNASequence.
func GenbankToAnnotatedSeq ¶
func GenbankToAnnotatedSeq(file wtype.File) (annotated wtype.DNASequence, err error)
parses a genbank file into a DNASEquence making features from annotations
func GenbankToFeaturelessDNASequence ¶
func GenbankToFeaturelessDNASequence(sequenceFile wtype.File) (wtype.DNASequence, error)
Parses file of type .gb to DNASequence. Features are not annotated
Types ¶
This section is empty.
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