store/

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Published: May 7, 2019 License: Apache-2.0

README

bíogo

#Store

Build Status

##Installation

    $ go get github.com/biogo/store/...

##Overview

Store provides a number of data store types that are useful for bioinformatic analysis.

  • Left-Leaning Red-Black tree

  • Interval tree

  • k-d tree

  • Run-length encoding data store

Citing

If you use bíogo, please cite Kortschak and Adelson "bíogo: a simple high-performance bioinformatics toolkit for the Go language", doi:10.1101/005033.

##Library Structure and Coding Style

The coding style should be aligned with normal Go idioms as represented in the Go core libraries.

##Copyright and License

Copyright ©2011-2013 The bíogo Authors except where otherwise noted. All rights reserved. Use of this source code is governed by a BSD-style license that can be found in the LICENSE file.

The bíogo logo is derived from Bitstream Charter, Copyright ©1989-1992 Bitstream Inc., Cambridge, MA.

BITSTREAM CHARTER is a registered trademark of Bitstream Inc.

Directories

Path Synopsis
Package interval implements an interval tree based on an augmented Left-Leaning Red Black tree.
Package interval implements an interval tree based on an augmented Left-Leaning Red Black tree.
landscape
Package landscape implements persistence landscape calculation for a set of intervals.
Package landscape implements persistence landscape calculation for a set of intervals.
Package kdtree implements a k-d tree.
Package kdtree implements a k-d tree.
Package llrb implements Left-Leaning Red Black trees as described by Robert Sedgewick.
Package llrb implements Left-Leaning Red Black trees as described by Robert Sedgewick.
Package step implements a step vector type.
Package step implements a step vector type.

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