notsignificant

package

v0.0.0-...-40008dc Latest Latest Go to latest Published: Jun 11, 2022 License: MIT Imports: 12 Imported by: 0

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Generates a list of preys that were not significant with any bait in a SAINT file.

parameters	definition	default
fdr	fdr threshold for significance (inclusive)	0.01
outFile	output file name	not-significant.txt
saint	saint file name	0

txt file list baits a preys was seen with, its maximum spectral count (from Spec column), the best FDR it had and its average (mean) value in controls calculated for the row where the maximum spectral count was found

Package notsignificant outputs non significant preys

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func List(fileOptions map[string]interface{})

List reads a SAINT txt file and outputs a list of non-significant preys.

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