Documentation ¶ Overview ¶ Package read reads input files Index ¶ func Database(filename string, ignoreInvalid bool) ([]types.Protein, map[string]string) func Peptides(options types.Parameters) ([]types.Peptide, map[string]string, string) Constants ¶ This section is empty. Variables ¶ This section is empty. Functions ¶ func Database ¶ func Database(filename string, ignoreInvalid bool) ([]types.Protein, map[string]string) Database reads a fasta database and generates a gene ID to gene name map func Peptides ¶ func Peptides(options types.Parameters) ([]types.Peptide, map[string]string, string) Peptides is an interface for opening a peptide file and passing it to the correct parser func Peptides(filename string, pipeline string, fdr, peptideProbabilty float64, inferEnzyme bool) ([]types.Peptide, map[string]string, string) { Types ¶ This section is empty. Source Files ¶ View all Source files database.go msplitdda.go msplitdia.go openswath.go peptide.go tpp.go Click to show internal directories. Click to hide internal directories.
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