sequencing

package

v0.0.0-...-85e8820 Latest Latest Go to latest Published: Apr 2, 2024 License: MIT Imports: 4 Imported by: 0

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Repository

github.com/koeng101/dnadesign

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Documentation ¶

Overview ¶

Package sequencing contains functions associated with handling sequencing data.

This is a work-in-progess, and not ready for production.

Index ¶

func DualBarcodeFastq(ctx context.Context, forwardPrimer string, reversePrimer string, ...) error
func MegamashFastq(ctx context.Context, megamashMap megamash.MegamashMap, input <-chan fastq.Read, ...) error

Constants ¶

This section is empty.

Variables ¶

This section is empty.

Functions ¶

func DualBarcodeFastq ¶

func DualBarcodeFastq(ctx context.Context, forwardPrimer string, reversePrimer string, primerSet barcoding.DualBarcodePrimerSet, input <-chan fastq.Read, output chan<- fastq.Read) error

func MegamashFastq ¶

func MegamashFastq(ctx context.Context, megamashMap megamash.MegamashMap, input <-chan fastq.Read, output chan<- fastq.Read) error

Types ¶

This section is empty.

Source Files ¶

View all Source files

sequencing.go

Directories ¶

Path	Synopsis
barcoding
nanopore Package nanopore contains data associated with nanopore sequencing.	Package nanopore contains data associated with nanopore sequencing.

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