complexity

package
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Published: Jan 6, 2017 License: BSD-3-Clause Imports: 4 Imported by: 0

Documentation

Overview

Package complexity provides routines for evaluating sequence complexity.

Index

Constants

This section is empty.

Variables

This section is empty.

Functions

func Entropic

func Entropic(s seq.Sequence, start, end int) (ce float64, err error)

Entropic returns the entropic complexity of a segment of s defined by start and end.

func WF

func WF(s seq.Sequence, start, end int) (cwf float64, err error)

WF returns the Wootton and Federhen complexity of a segment of s defined by start and end.

func Z

func Z(s seq.Sequence, start, end int) (cz float64, err error)

Z returns the zlib compression estimate of complexity of a segment of s defined by start and end.

Types

This section is empty.

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