hnsw

package
v1.24.10 Latest Latest
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Published: Apr 19, 2024 License: BSD-3-Clause Imports: 46 Imported by: 0

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Index

Constants

View Source
const (
	// DefaultSearchByDistInitialLimit :
	// the initial limit of 100 here is an
	// arbitrary decision, and can be tuned
	// as needed
	DefaultSearchByDistInitialLimit = 100

	// DefaultSearchByDistLimitMultiplier :
	// the decision to increase the limit in
	// multiples of 10 here is an arbitrary
	// decision, and can be tuned as needed
	DefaultSearchByDistLimitMultiplier = 10
)

Variables

This section is empty.

Functions

func New

func New(cfg Config, uc ent.UserConfig, tombstoneCallbacks, shardCompactionCallbacks,
	shardFlushCallbacks cyclemanager.CycleCallbackGroup, store *lsmkv.Store,
) (*hnsw, error)

New creates a new HNSW index, the commit logger is provided through a thunk (a function which can be deferred). This is because creating a commit logger opens files for writing. However, checking whether a file is present, is a criterium for the index to see if it has to recover from disk or if its a truly new index. So instead the index is initialized, with un-biased disk checks first and only then is the commit logger created

func NewCommitLogger

func NewCommitLogger(rootPath, name string, logger logrus.FieldLogger,
	maintenanceCallbacks cyclemanager.CycleCallbackGroup, opts ...CommitlogOption,
) (*hnswCommitLogger, error)

func NewFromJSONDump

func NewFromJSONDump(dumpBytes []byte, vecForID common.VectorForID[float32]) (*hnsw, error)

func NewFromJSONDumpMap

func NewFromJSONDumpMap(dumpBytes []byte, vecForID common.VectorForID[float32]) (*hnsw, error)

func NewWriter

func NewWriter(w *os.File) *bufWriter

NewWriter returns a new Writer whose buffer has the default size.

func NewWriterSize

func NewWriterSize(w *os.File, size int) *bufWriter

NewWriterSize returns a new Writer whose buffer has at least the specified size. If the argument *os.File is already a Writer with large enough size, it returns the underlying Writer.

func ValidateUserConfigUpdate

func ValidateUserConfigUpdate(initial, updated schema.VectorIndexConfig) error

Types

type BufferedLinksLogger

type BufferedLinksLogger interface {
	AddLinkAtLevel(nodeid uint64, level int, target uint64) error
	ReplaceLinksAtLevel(nodeid uint64, level int, targets []uint64) error
	Close() error // Close should Flush and Close
}

type CommitLogCombiner

type CommitLogCombiner struct {
	// contains filtered or unexported fields
}

func NewCommitLogCombiner

func NewCommitLogCombiner(rootPath, id string, threshold int64,
	logger logrus.FieldLogger,
) *CommitLogCombiner

func (*CommitLogCombiner) Do

func (c *CommitLogCombiner) Do() (bool, error)

type CommitLogger

type CommitLogger interface {
	ID() string
	AddNode(node *vertex) error
	SetEntryPointWithMaxLayer(id uint64, level int) error
	AddLinkAtLevel(nodeid uint64, level int, target uint64) error
	ReplaceLinksAtLevel(nodeid uint64, level int, targets []uint64) error
	AddTombstone(nodeid uint64) error
	RemoveTombstone(nodeid uint64) error
	DeleteNode(nodeid uint64) error
	ClearLinks(nodeid uint64) error
	ClearLinksAtLevel(nodeid uint64, level uint16) error
	Reset() error
	Drop(ctx context.Context) error
	Flush() error
	Shutdown(ctx context.Context) error
	RootPath() string
	SwitchCommitLogs(bool) error
	AddPQ(compressionhelpers.PQData) error
}

func MakeNoopCommitLogger

func MakeNoopCommitLogger() (CommitLogger, error)

type CommitlogOption

type CommitlogOption func(l *hnswCommitLogger) error

func WithAllocChecker added in v1.24.9

func WithAllocChecker(mm memwatch.AllocChecker) CommitlogOption

func WithCommitlogThreshold

func WithCommitlogThreshold(size int64) CommitlogOption

func WithCommitlogThresholdForCombining

func WithCommitlogThresholdForCombining(size int64) CommitlogOption

type Config

type Config struct {
	// internal
	RootPath              string
	ID                    string
	MakeCommitLoggerThunk MakeCommitLogger
	VectorForIDThunk      common.VectorForID[float32]
	TempVectorForIDThunk  common.TempVectorForID
	Logger                logrus.FieldLogger
	DistanceProvider      distancer.Provider
	PrometheusMetrics     *monitoring.PrometheusMetrics
	AllocChecker          memwatch.AllocChecker

	// metadata for monitoring
	ShardName string
	ClassName string
}

Config for a new HSNW index, this contains information that is derived internally, e.g. by the shard. All User-settable config is specified in Config.UserConfig

func (Config) Validate

func (c Config) Validate() error

type CorruptCommitLogFixer

type CorruptCommitLogFixer struct {
	// contains filtered or unexported fields
}

CorruptCommitLogFixer helps identify potentially corrupt commit logs and tries to mitigate the problem

func NewCorruptedCommitLogFixer

func NewCorruptedCommitLogFixer(logger logrus.FieldLogger) *CorruptCommitLogFixer

func (*CorruptCommitLogFixer) Do

func (fixer *CorruptCommitLogFixer) Do(fileNames []string) ([]string, error)

Do tries to delete files that could be corrupt and removes them from the returned list, indicating that the index should no longer try to read them

A file is considered corrupt if it has the .condensed suffix - yet there is a file with the same name without that suffix. This would indicate that trying to condense the file has somehow failed or been interrupted, as a successful condensing would have been succeeded by the removal of the original file. We thus assume the file must be corrupted, and delete it, so that the original will be used instead.

type DeserializationResult

type DeserializationResult struct {
	Nodes             []*vertex
	Entrypoint        uint64
	Level             uint16
	Tombstones        map[uint64]struct{}
	EntrypointChanged bool
	PQData            compressionhelpers.PQData
	Compressed        bool

	// If there is no entry for the links at a level to be replaced, we must
	// assume that all links were appended and prior state must exist
	// Similarly if we run into a "Clear" we need to explicitly set the replace
	// flag, so that future appends aren't always appended and we run into a
	// situation where reading multiple condensed logs in succession leads to too
	// many connections as discovered in
	// https://github.com/weaviate/weaviate/issues/1868
	LinksReplaced map[uint64]map[uint16]struct{}
}
func (dr DeserializationResult) ReplaceLinks(node uint64, level uint16) bool

type Deserializer

type Deserializer struct {
	// contains filtered or unexported fields
}

func NewDeserializer

func NewDeserializer(logger logrus.FieldLogger) *Deserializer

func (*Deserializer) Do

func (d *Deserializer) Do(fd *bufio.Reader,
	initialState *DeserializationResult, keepLinkReplaceInformation bool,
) (*DeserializationResult, int, error)
func (d *Deserializer) ReadAddLinks(r io.Reader,
	res *DeserializationResult,
) (int, error)

func (*Deserializer) ReadAddTombstone

func (d *Deserializer) ReadAddTombstone(r io.Reader, tombstones map[uint64]struct{}) error
func (d *Deserializer) ReadClearLinks(r io.Reader, res *DeserializationResult,
	keepReplaceInfo bool,
) error

func (*Deserializer) ReadClearLinksAtLevel

func (d *Deserializer) ReadClearLinksAtLevel(r io.Reader, res *DeserializationResult,
	keepReplaceInfo bool,
) error

func (*Deserializer) ReadCommitType

func (d *Deserializer) ReadCommitType(r io.Reader) (HnswCommitType, error)

func (*Deserializer) ReadDeleteNode

func (d *Deserializer) ReadDeleteNode(r io.Reader, res *DeserializationResult) error

func (*Deserializer) ReadEP

func (d *Deserializer) ReadEP(r io.Reader) (uint64, uint16, error)

func (*Deserializer) ReadKMeansEncoder added in v1.18.0

func (d *Deserializer) ReadLink(r io.Reader, res *DeserializationResult) error
func (d *Deserializer) ReadLinks(r io.Reader, res *DeserializationResult,
	keepReplaceInfo bool,
) (int, error)

func (*Deserializer) ReadNode

func (d *Deserializer) ReadNode(r io.Reader, res *DeserializationResult) error

func (*Deserializer) ReadPQ added in v1.18.0

func (d *Deserializer) ReadPQ(r io.Reader, res *DeserializationResult) error

func (*Deserializer) ReadRemoveTombstone

func (d *Deserializer) ReadRemoveTombstone(r io.Reader, tombstones map[uint64]struct{}) error

func (*Deserializer) ReadTileEncoder added in v1.18.0

type HnswCommitType

type HnswCommitType uint8 // 256 options, plenty of room for future extensions
const (
	AddNode HnswCommitType = iota
	SetEntryPointMaxLevel
	AddLinkAtLevel
	ReplaceLinksAtLevel
	AddTombstone
	RemoveTombstone
	ClearLinks
	DeleteNode
	ResetIndex
	ClearLinksAtLevel // added in v1.8.0-rc.1, see https://github.com/weaviate/weaviate/issues/1701
	AddLinksAtLevel   // added in v1.8.0-rc.1, see https://github.com/weaviate/weaviate/issues/1705
	AddPQ
)

func (HnswCommitType) String

func (t HnswCommitType) String() string

type JSONDump

type JSONDump struct {
	Labels              []string            `json:"labels"`
	ID                  string              `json:"id"`
	Entrypoint          uint64              `json:"entrypoint"`
	CurrentMaximumLayer int                 `json:"currentMaximumLayer"`
	Tombstones          map[uint64]struct{} `json:"tombstones"`
	Nodes               []JSONDumpNode      `json:"nodes"`
}

type JSONDumpMap

type JSONDumpMap struct {
	Labels              []string            `json:"labels"`
	ID                  string              `json:"id"`
	Entrypoint          uint64              `json:"entrypoint"`
	CurrentMaximumLayer int                 `json:"currentMaximumLayer"`
	Tombstones          map[uint64]struct{} `json:"tombstones"`
	Nodes               []JSONDumpNodeMap   `json:"nodes"`
}

type JSONDumpNode

type JSONDumpNode struct {
	ID          uint64     `json:"id"`
	Level       int        `json:"level"`
	Connections [][]uint64 `json:"connections"`
}

type JSONDumpNodeMap

type JSONDumpNodeMap struct {
	ID          uint64           `json:"id"`
	Level       int              `json:"level"`
	Connections map[int][]uint64 `json:"connections"`
}

type MakeCommitLogger

type MakeCommitLogger func() (CommitLogger, error)

type MemoryCondensor

type MemoryCondensor struct {
	// contains filtered or unexported fields
}

func NewMemoryCondensor

func NewMemoryCondensor(logger logrus.FieldLogger) *MemoryCondensor

func (*MemoryCondensor) AddLinkAtLevel

func (c *MemoryCondensor) AddLinkAtLevel(nodeid uint64, level uint16, target uint64) error

func (*MemoryCondensor) AddLinksAtLevel

func (c *MemoryCondensor) AddLinksAtLevel(nodeid uint64, level uint16, targets []uint64) error

func (*MemoryCondensor) AddNode

func (c *MemoryCondensor) AddNode(node *vertex) error

AddNode adds an empty node

func (*MemoryCondensor) AddPQ added in v1.19.6

func (*MemoryCondensor) AddTombstone

func (c *MemoryCondensor) AddTombstone(nodeid uint64) error

func (*MemoryCondensor) Do

func (c *MemoryCondensor) Do(fileName string) error

func (*MemoryCondensor) SetEntryPointWithMaxLayer

func (c *MemoryCondensor) SetEntryPointWithMaxLayer(id uint64, level int) error

func (*MemoryCondensor) SetLinksAtLevel

func (c *MemoryCondensor) SetLinksAtLevel(nodeid uint64, level int, targets []uint64) error

type Metrics

type Metrics struct {
	// contains filtered or unexported fields
}

func NewMetrics

func NewMetrics(prom *monitoring.PrometheusMetrics,
	className, shardName string,
) *Metrics

func (*Metrics) AddTombstone

func (m *Metrics) AddTombstone()

func (*Metrics) CleanedUp

func (m *Metrics) CleanedUp()

func (*Metrics) DeleteVector

func (m *Metrics) DeleteVector()

func (*Metrics) EndCleanup

func (m *Metrics) EndCleanup(threads int)

func (*Metrics) GrowDuration

func (m *Metrics) GrowDuration(start time.Time)

func (*Metrics) InsertVector

func (m *Metrics) InsertVector()

func (*Metrics) RemoveTombstone

func (m *Metrics) RemoveTombstone()

func (*Metrics) SetSize

func (m *Metrics) SetSize(size int)

func (*Metrics) SetTombstoneDeleteListSize added in v1.24.9

func (m *Metrics) SetTombstoneDeleteListSize(size int)

func (*Metrics) StartCleanup

func (m *Metrics) StartCleanup(threads int)

func (*Metrics) StartupProgress

func (m *Metrics) StartupProgress(ratio float64)

func (*Metrics) TombstoneFindGlobalEntrypoint added in v1.24.9

func (m *Metrics) TombstoneFindGlobalEntrypoint()

func (*Metrics) TombstoneFindLocalEntrypoint added in v1.24.9

func (m *Metrics) TombstoneFindLocalEntrypoint()

func (*Metrics) TombstoneReassignNeighbor added in v1.24.9

func (m *Metrics) TombstoneReassignNeighbor()

func (*Metrics) TrackDelete

func (m *Metrics) TrackDelete(start time.Time, step string)

func (*Metrics) TrackInsertObserver

func (m *Metrics) TrackInsertObserver(step string) Observer

func (*Metrics) TrackStartupIndividual

func (m *Metrics) TrackStartupIndividual(start time.Time)

func (*Metrics) TrackStartupReadCommitlogDiskIO

func (m *Metrics) TrackStartupReadCommitlogDiskIO(read int64, nanoseconds int64)

func (*Metrics) TrackStartupTotal

func (m *Metrics) TrackStartupTotal(start time.Time)

type MmapCondensor

type MmapCondensor struct {
	// contains filtered or unexported fields
}

func NewMmapCondensor

func NewMmapCondensor(connectionsPerLevel int) *MmapCondensor

func (*MmapCondensor) Do

func (c *MmapCondensor) Do(fileName string) error

type MmapCondensorAnalyzer

type MmapCondensorAnalyzer struct {
	// contains filtered or unexported fields
}

func (*MmapCondensorAnalyzer) Do

func (a *MmapCondensorAnalyzer) Do(file *os.File) (mmapIndex, error)

func (*MmapCondensorAnalyzer) ReadAddTombstone

func (a *MmapCondensorAnalyzer) ReadAddTombstone(r io.Reader) error
func (a *MmapCondensorAnalyzer) ReadClearLinks(r io.Reader) error

func (*MmapCondensorAnalyzer) ReadCommitType

func (a *MmapCondensorAnalyzer) ReadCommitType(r io.Reader) (HnswCommitType, error)

func (*MmapCondensorAnalyzer) ReadDeleteNode

func (a *MmapCondensorAnalyzer) ReadDeleteNode(r io.Reader) error

func (*MmapCondensorAnalyzer) ReadEP

func (a *MmapCondensorAnalyzer) ReadEP(r io.Reader) error
func (a *MmapCondensorAnalyzer) ReadLink(r io.Reader) error
func (a *MmapCondensorAnalyzer) ReadLinks(r io.Reader) error

func (*MmapCondensorAnalyzer) ReadNode

func (a *MmapCondensorAnalyzer) ReadNode(r io.Reader) error

func (*MmapCondensorAnalyzer) ReadRemoveTombstone

func (a *MmapCondensorAnalyzer) ReadRemoveTombstone(r io.Reader) error

type MmapCondensorReader

type MmapCondensorReader struct {
	// contains filtered or unexported fields
}

func (*MmapCondensorReader) Do

func (r *MmapCondensorReader) Do(source *os.File, index mmapIndex, targetName string) error

type NoopCommitLogger

type NoopCommitLogger struct{}

NoopCommitLogger implements the CommitLogger interface, but does not actually write anything to disk

func (*NoopCommitLogger) AddLinkAtLevel

func (n *NoopCommitLogger) AddLinkAtLevel(nodeid uint64, level int, target uint64) error

func (*NoopCommitLogger) AddNode

func (n *NoopCommitLogger) AddNode(node *vertex) error

func (*NoopCommitLogger) AddPQ added in v1.18.0

func (*NoopCommitLogger) AddTombstone

func (n *NoopCommitLogger) AddTombstone(nodeid uint64) error
func (n *NoopCommitLogger) ClearLinks(nodeid uint64) error

func (*NoopCommitLogger) ClearLinksAtLevel

func (n *NoopCommitLogger) ClearLinksAtLevel(nodeid uint64, level uint16) error

func (*NoopCommitLogger) Close

func (n *NoopCommitLogger) Close() error

func (*NoopCommitLogger) DeleteNode

func (n *NoopCommitLogger) DeleteNode(nodeid uint64) error

func (*NoopCommitLogger) Drop

func (n *NoopCommitLogger) Drop(ctx context.Context) error

func (*NoopCommitLogger) Flush

func (n *NoopCommitLogger) Flush() error

func (*NoopCommitLogger) ID

func (n *NoopCommitLogger) ID() string

func (*NoopCommitLogger) NewBufferedLinksLogger

func (n *NoopCommitLogger) NewBufferedLinksLogger() BufferedLinksLogger

func (*NoopCommitLogger) RemoveTombstone

func (n *NoopCommitLogger) RemoveTombstone(nodeid uint64) error

func (*NoopCommitLogger) ReplaceLinksAtLevel

func (n *NoopCommitLogger) ReplaceLinksAtLevel(nodeid uint64, level int, targets []uint64) error

func (*NoopCommitLogger) Reset

func (n *NoopCommitLogger) Reset() error

func (*NoopCommitLogger) RootPath

func (n *NoopCommitLogger) RootPath() string

func (*NoopCommitLogger) SetEntryPointWithMaxLayer

func (n *NoopCommitLogger) SetEntryPointWithMaxLayer(id uint64, level int) error

func (*NoopCommitLogger) Shutdown

func (n *NoopCommitLogger) Shutdown(context.Context) error

func (*NoopCommitLogger) StartSwitchLogs

func (n *NoopCommitLogger) StartSwitchLogs() chan struct{}

func (*NoopCommitLogger) SwitchCommitLogs

func (n *NoopCommitLogger) SwitchCommitLogs(force bool) error

type Observer

type Observer func(start time.Time)

Directories

Path Synopsis
asm
asm only has amd64 specific implementations at the moment
asm only has amd64 specific implementations at the moment

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